NimOS Overview
NimOS is the software used to control the microscope. Basic controls and terms are highlighted below. For video instructions on how to use NimOS to take an acquisition, check here.
- For NimOS tabs, check here.
- For laser control, check here.
- For stage control, check here.
- For optical control, check here.
- For temperature control, check here.
- For acquisition control, check here.
- For image display options, check here.
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NimOS Installation Guide
NimOS Auto-Update In theory, NimOS will pop up a window upon shutdown whenever an update is available: It is recommended to perform the update. Click on Download and Install Update to proceed with the update. The installation process will be ...Function: Overview Scan
The Overview Scan function allows acquiring a mosaic containing multiple positions for identifying the imaging positions (e.g. cell positions): Scan Parameters: set the origin and number of tiles to acquire for X and Y. Set Initial Position as ...NimOS Analysis
NimOS provides functions for data analysis: Analysis: Tools Analysis: Viewing Options Analysis: Filter Analysis: Localizations Analysis: Drift CorrectionNimOS Tabs
NimOS Tabs: Files: Load Data: open an acquisition, which will then appear in the Analyze interface. Instrument: Instrument Config: show general information about the microscope. Manual Connect: manually select an instrument file to connect to the ...Camera calibration with NimOS 19.7
The procedure takes around 10 min INSTRUCTIONS: 1- Log in the Nanoimager laptop with an administrator account 2- If not already done, Download CODI Acquisition from the following link (1gb) here 3- Install CODI Acquisition and accept every prompt ...